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| Position | Top player | Team ranking | Top prospect | Organizational ranking | Overall ranking |
|---|---|---|---|---|---|
| Catchers | Steve Brohard | 15th | Chad Parga | Tied for 17th | 13th |
| First Basemen | Matt Ferris | 19th | John Stout | 18th | 18th |
| Second Basemen | Dylan Marris | 30th | Kevin Levick | Tied for 23rd | 29th |
| Third Basemen | Justin Heath | 22nd | Dave Tennant | 14th | 18th |
| Shortstops | Israel Galvan | 12th | Dave Klotz | 29th | 23rd |
| Left Fielders | Colin Woodson | 6th | Brenden McFaul | 26th | 25th |
| Center Fielders | Chris Grover | 15th | Antonio Gomez | Tied for 11th | 10th |
| Right Fielders | Rich Jones | 30th | Jason Sisk | 11th | 26th |
| Starting Pitchers | Juan Murillo | 3rd | Jim Johnson | 27th | 4th |
| Relievers | Jose Munoz | 22nd | Steve Gibbons | 28th | 28th |
| Closers | Jonathan Jackson | 18th | Cameron Lopez | Tied for 20th | 18th |
