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| Position | Top player | Team ranking | Top prospect | Organizational ranking | Overall ranking |
|---|---|---|---|---|---|
| Catchers | Ryan Gruber | 8th | Alex Lopez | 15th | 7th |
| First Basemen | German Leal | 29th | Mark Rosser | Tied for 23rd | 25th |
| Second Basemen | Nick Lindley | 4th | Jorge Davalos | 2nd | 3rd |
| Third Basemen | John Bunch | 20th | Tied for 29th | 29th | |
| Shortstops | Jaime Flores | 20th | Eric Webb | 21st | 23rd |
| Left Fielders | Zach Yocom | 4th | Manny Diaz | 12th | Tied for 4th |
| Center Fielders | Russ Boswell | 5th | Kevin Donhauser | 13th | 3rd |
| Right Fielders | Tony Gomez | 7th | Josh Budge | 10th | 6th |
| Starting Pitchers | Xavier Florez | 22nd | Xavier Boyle | 3rd | 13th |
| Relievers | Steve Cason | 9th | Mike Mackey | 21st | 7th |
| Closers | Mel Martinez | 17th | Gabe Smith | 24th | 18th |
