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| Position | Top player | Team ranking | Top prospect | Organizational ranking | Overall ranking |
|---|---|---|---|---|---|
| Catchers | Steve Brohard | 15th | Chad Parga | 16th | 11th |
| First Basemen | Matt Ferris | Tied for 10th | John Stout | 25th | 10th |
| Second Basemen | Israel Galvan | 24th | Luke Cappelluti | Tied for 20th | 24th |
| Third Basemen | Scott Sneed | 16th | Dave Tennant | 19th | 12th |
| Shortstops | Eric Petry | 20th | 28th | 30th | |
| Left Fielders | Colin Woodson | 11th | Chad Sample | Tied for 19th | 13th |
| Center Fielders | Chris Grover | 16th | Juan Maes | 5th | 8th |
| Right Fielders | John Bragg | 18th | Jason Sisk | 26th | 28th |
| Starting Pitchers | Juan Murillo | 3rd | Jim Johnson | 28th | 22nd |
| Relievers | Jose Munoz | 16th | Cameron Lopez | 24th | 19th |
| Closers | Jonathan Jackson | 8th | Aaron Russell | Tied for 19th | 11th |
